LOCUS BG076378 660 bp mRNA linear EST 12-MAY-2010 DEFINITION H3159B02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3159B02 3', mRNA sequence. ACCESSION BG076378 VERSION BG076378.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 660) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076378.1. Other_ESTs: H3159B02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3159 row: B column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..660 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3159B02-3" /db_xref="taxon:10090" /clone="H3159B02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 240 a 137 c 110 g 173 t ORIGIN 1 cgagataaaa actttatttt acaattttat aaagcagctt tacattaagc acaaacaacc 61 catttaactt tgtatagaaa caaaatacct ttccatttga aaaaatcaag ttttgctgta 121 tataaaacta acatgtgcac attgtgcttg aactgcaaag gctgtacagc tttacagagg 181 accaccctcc aggagggcat ccagtaaaca cattattgca tatttgacac atggcatata 241 ccccacatgt acaatggaga agcagggaaa caattacaag aacaaaccag cagcttttgg 301 taagagtctg tacaccaaca aagacagagg ccctgcatct ggagagtgct tgtgacattt 361 ctacacacct cacagatgtc gtgaggctct tgaacgaagc cgttatatac agtaactcct 421 aaaggtcaaa cctgctcttt tctagaaact tttggctgtt ttactactga aatggtgaca 481 gattcaacat ggaagctaac tcagagaagt gaaccaaacc aatatcctta aaaaaaaaga 541 atcacaacaa aaaattaaaa taccctcccc attctctcta tactcaggat aagtaaacat 601 ttacatgatt taaaaaccta gggaactttg tagttttctg gaggcaaaaa tgcatgggtc //