LOCUS BG076369 733 bp mRNA linear EST 12-MAY-2010 DEFINITION H3158H09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3158H09 3', mRNA sequence. ACCESSION BG076369 VERSION BG076369.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 733) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076369.1. Other_ESTs: H3158H09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3158 row: H column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..733 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3158H09-3" /db_xref="taxon:10090" /clone="H3158H09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 216 a 151 c 144 g 222 t ORIGIN 1 aaataaatga gctaatcttt tttttttaag gatttattta cttttattat atgtaaatac 61 actgtagctg tcctcagaca ccccagaaga gggcatcaga tttcattaca gatggttgtg 121 agccaccatg tggttgctgg gatttgaact caggaccttt ggaagagcag ccagcactct 181 taacctctga gccctctcgc cagcccaaga tcatctctta aggccttttc agtcccagtt 241 atgttcaaaa gaagacacag agctgggaca tgtcctttca gtgatagtaa taagaacatt 301 agtacctttt gaagctacca aacatctgtg catggcccaa aaactttcca aagtcaatgt 361 ggaacatgtg tcctgtgctt cgaagcatta tattgtcatt gtgccgatca caaatgccta 421 aaacataggt ggctacacag cacccagcac aagagtagat aaagttctca gaagcctgta 481 ataaagacat aaaattatgt tagaaaaaaa tgtcttaaag gaggcaaggt gaggcagggt 541 ttgccagtgt gcaatagtaa tcgatcaccg tttttttttt ttttttttgg tcatagggtt 601 tcactatgta gccctagctg tcctcaaatt cacatagatc tacctgtctc tgccttctgg 661 ttattgggat aaccactaca tcaggtccaa tccagcactc tttaaaaata atatttggaa 721 agctgggtct tgt //