LOCUS BG076337 726 bp mRNA linear EST 12-MAY-2010 DEFINITION H3158E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3158E09 3', mRNA sequence. ACCESSION BG076337 VERSION BG076337.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 726) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076337.1. Other_ESTs: H3158E09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3158 row: E column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..726 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3158E09-3" /db_xref="taxon:10090" /clone="H3158E09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 258 a 161 c 130 g 177 t ORIGIN 1 cataaatctc atcactttat tcgctggtgg gcaatgaagc aacttctaat gttgtagaga 61 aatgctgaag gtcaggcata ctcttcggtt cacagagcta cacttacgct aaagtgggcg 121 accagagcac ccaaataaac catacgtctt ctgaaagtac atcagtacag ccaggctcac 181 cgagacaagc atctgttcaa ccggcacgca gttaacctga tactcatgtg tggatgcaga 241 gggagaatcc gttcagaagt tgctaagcag attcttcggt ataaaaaaca aaacaaaaca 301 aacaacaaca acaacaacaa aaacccaaac atcaaacagc acagaagtaa aatcagctcc 361 cagtgtttta taaatgagag ccaagaaagc ctggttctcc ccaaccagtg ctgcctcatt 421 ttgtacctcc cacgacatga tgagcaacaa gggatttttg atatgttcac aagacagcat 481 aaataacaat aaaatatttt tctgtacaaa ttactaaact atagtgaaaa aggataaaac 541 actttttcac aatagcaaaa tgtcttctgg gaatctcaaa gagtcatgat cttttctaaa 601 actgtaaaat cccatacaca ctgcactcaa tggcagtact agacaacatt ttctgcaact 661 gtagtatcaa aaatctggta gcaaattcgt cgctctgttc cgatggtgac attgtaggac 721 ttgagg //