LOCUS BG076329 675 bp mRNA linear EST 12-MAY-2010 DEFINITION H3158D09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3158D09 3', mRNA sequence. ACCESSION BG076329 VERSION BG076329.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 675) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076329.1. Other_ESTs: H3158D09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3158 row: D column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..675 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3158D09-3" /db_xref="taxon:10090" /clone="H3158D09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 133 a 182 c 186 g 174 t ORIGIN 1 ctctttccct cgcgcttgtg tgttctgttt ttaattgagt taattggata ccgcatcagg 61 ttatgggtgt tcaatcacag cattaattat tcctttttct taagctcttg gttgccatag 121 ctggagcctt tctctatctc agtcaatcct atcagtctcc ggactccgaa ggaagctgct 181 cccacgaacc ccaagaacgt caggatgagg agcggggatc cactggcaaa gacacccagg 241 acgaagctga agaggggtga gaggaggatg gtggcccagc acaggaagtt caggagggtc 301 cacggccttc gggcaggctt gaactgctcc cctgggaata cacccttctg cttgtacatc 361 tcttgcaggg catccttctc ctggtacagc ttgtgaagcc actgggcggc gctggtctca 421 tctgctggga tgtcttccag ggggaacctc ctcacacaca tgtctgcctc atatttcttc 481 ccatacagga tccccagtag agatgggttc ttgttccctc tgaagttcag ggtcacgtca 541 tagatagctg caactgtccc ccggaggcac tggactgccg tggtaaagcc cttggtccgg 601 ggcagcaggt ggtacttgag tgggggcagc ccttggaggc agccacctcc atgctgatgc 661 gatgcttggt ctctg //