LOCUS BG076317 738 bp mRNA linear EST 12-MAY-2010 DEFINITION H3158C06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3158C06 3', mRNA sequence. ACCESSION BG076317 VERSION BG076317.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 738) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076317.1. Other_ESTs: H3158C06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3158 row: C column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..738 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3158C06-3" /db_xref="taxon:10090" /clone="H3158C06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 177 a 177 c 172 g 212 t ORIGIN 1 ctttttgtgt ttttgttttc tgtttttgtt ttttgctgat ccaaatagtg aatccaacat 61 aacatccttt caaatgtcaa tctccttaac tgcttaacac agtctagagt ctgggtggaa 121 agacacgtcc tgattcaggc aggcttgggg acttcacagt tcatccggcc atcacagggg 181 taatttcaac ttggttaaaa ttctgcaagt agctccacct cccattcaac acacatcact 241 cgttctcttg atccctcctg agtatctcaa cgtgcaaagg gctgttctcc ccatttcaca 301 gatagaagca tgaagggcca gattgctctg gagatcaagt ggtgtggtac cagggtgaat 361 gtcgggagac ctcaagtggg tgcctcacag cggcagtgaa tggagtctgc tgagggtaga 421 atctgctgtc tgacacagga ctattcttac ggtccctaac aaccatcaaa gcactcctca 481 gtgtggcttt ccctaacttg caaatggagt acaaaaagac tatcctctcc ccagttggat 541 tccagacaca gtccttcctc ttgcatgcct ctccgggagg gagcagctct ctgggagaag 601 aatgaggctc tttagccatg catagcctga aggaggatgg tagtttctgc tgcatcaggt 661 gctcagccta ggaagacact tctccaaagc cttggtagct aggcaagtcc agagagatgg 721 attgtttttg tttttttt //