LOCUS BG076244 695 bp mRNA linear EST 12-MAY-2010 DEFINITION H3157D01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3157D01 3', mRNA sequence. ACCESSION BG076244 VERSION BG076244.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 695) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076244.1. Other_ESTs: H3157D01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3157 row: D column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..695 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3157D01-3" /db_xref="taxon:10090" /clone="H3157D01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 182 a 163 c 183 g 167 t ORIGIN 1 gggtctatag taattttatt gtaacagaga aaccaggcgg cagtacgtct acataattag 61 agcagatggt ggttatcttt cccaagggcg gagtctgagc cgggctggca gcacacaaac 121 cccagagtat ctccttctga tcctaccctg cacgtctgac tcatgtgaag agacaggctg 181 tgcagccagg atggatgaag aggtccagct gggcagaggc cccatcccag taggagccaa 241 tcaatcaatg actgaagagg actctgaaat caagggcagg gtctctctct ctccacggct 301 ctttgatgag agaggaggct atgcaggagc agaaaaccta tgctctccat tcttatgtaa 361 ctccccccat aggctgaggc ggatgtttgc agtagaacgg gatgagactc taggctctag 421 aacagcaatg acaaggggca ggcggacacg acactacatc ttctactgtc cctgttgaag 481 tggcaacaga cctgttggtt tttgtaaagc ataatttctg taatgtgatc tgctgacaca 541 gtttgctcca caccaagagg acgaacttga ggacaactgt taatgacaga actagttatt 601 tttctcttat agcctctatt aggggaggct ctactggggt ccacggggga gcccctgata 661 ccacctgagg ctttaggtaa agcgtctgac ctatt //