LOCUS BG076167 811 bp mRNA linear EST 12-MAY-2010 DEFINITION H3156D07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3156D07 3', mRNA sequence. ACCESSION BG076167 VERSION BG076167.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 811) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076167.1. Other_ESTs: H3156D07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3156 row: D column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..811 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3156D07-3" /db_xref="taxon:10090" /clone="H3156D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 283 a 156 c 175 g 197 t ORIGIN 1 ctgagcatga aaataattta ttagacatct gacttttcaa acattgggcc cattggagac 61 agaattaaca tagctcacag aagagaaaaa gtattccagc caacaccggt ttcattcaga 121 ttgcatgggg agtctctgca tcctggagga cagccttacc ctaagcatcc atatattcga 181 tgctgacgac tggatgaatg atgacagatg gtgtcactga cgagtgtgac ttcaggaaca 241 ttcttacgca caagaaacag cacttcctga agcaagtctt tgataatcaa aaaaagagga 301 ataccatcaa gtatcacctg acagacagga agcagaatta tgcattttgg ccaatgggct 361 gctatggaaa aaaatgtcac aatgagattt ctgtaaaatc aaaaggtaaa ctttaattaa 421 cagcaaattt taatacgtga tcctgttact aaaaaccaga gtaaagaaaa ccaaataaca 481 aaatagaatt tagggaggaa acgcaggact gtgatgtgga atcacagttg cacttctttg 541 gctaactcat taaaaaatgc caattaaaca ctttcagtcc atttttattt tgtgaaaaag 601 cagcaaatca acattacaac tgaggaggaa cctgagtgtg cgtccgacag ggaagcacac 661 ggctaagtgg agtggcaagg gtttcaaaaa acccattaaa tgtctgatct cccaatctcc 721 agataaacag cactctgtga agtgactcgc aggggtcaga ggttattgct gtggagacaa 781 acctgcagtg cagtagcgtg agtcttgggc a //