LOCUS BG076088 712 bp mRNA linear EST 12-MAY-2010 DEFINITION H3155E04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3155E04 3', mRNA sequence. ACCESSION BG076088 VERSION BG076088.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 712) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076088.1. Other_ESTs: H3155E04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3155 row: E column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..712 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3155E04-3" /db_xref="taxon:10090" /clone="H3155E04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 169 a 205 c 182 g 156 t ORIGIN 1 atggttggag agtggacagc acttgtttat tgtccagttt cccaaaggga tgagaaattg 61 tcaggctagg gtgtggactc acgaggctgc ctgccaggcc cggtgctgct gggcaaatcg 121 ttgcatccga tcctcaagct ctggcctgaa atgtcggatc agaccctgta ctggccaggc 181 agccccatca cccagagcac aaatggtgtg gccttctatc tgcttgctga tctcccacag 241 ggagtcaatc tcagctggcc gggcatctcc cttcacaaat cgggccatca ccttgttcat 301 ccagtcaacg ccctcacggc acggggtaca ctggccacag ctctcatgct tgtagaactc 361 aatgagacga gcgatggctt tcacaatgtc tgtcgagcga tccataacaa taactgcagc 421 cgtgcccagg cctgtctgag cctgcaccag tgcatcgaag tccattagca cggtctcaca 481 cacagatttg ggaatcagtg gagtagatga gccaccagga atcacagcaa ggaggttgtc 541 ccagccacct gtgacaccac cagcatgttt ctcaatcagc tctttcagtg gcacagacat 601 ctcttcctcc acagtgcagg ggtggttgac atggccagag atgttaaaca atttggtacc 661 tgaattgcgt tctcggccaa agccagcaaa ccaggtgccc cacgacggca aa //