LOCUS BG076084 730 bp mRNA linear EST 12-MAY-2010
DEFINITION H3155D12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone
H3155D12 3', mRNA sequence.
ACCESSION BG076084
VERSION BG076084.2
DBLINK BioSample: SAMN00163148
KEYWORDS EST.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 730)
AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X.,
Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H.,
Wood,W.H. III, Becker,K.G. and Ko,M.S.H.
TITLE Genome-wide expression profiling of mid-gestation placenta and
embryo using a 15,000 mouse developmental cDNA microarray
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000)
PUBMED 10922068
COMMENT On Jan 26, 2001 this sequence version replaced BG076084.1.
Other_ESTs: H3155D12-5
Contact: George J. Kargul
Laboratory of Genetics
National Institute on Aging/National Institutes of Health
333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA
Email: cdna@lgsun.grc.nia.nih.gov
This clone set has been freely distributed to the community. Please
visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details.
Plate: H3155 row: D column: 12
Seq primer: -21M13 Forward
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..730
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="niaEST:H3155D12-3"
/db_xref="taxon:10090"
/clone="H3155D12"
/sex="clones arrayed from a variety of cdna libraries"
/clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set"
/dev_stage="Clones arrayed from a variety of cDNA
libraries"
/lab_host="DH10B"
/note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This
clone is among a rearrayed set of 15,247 clones from 11
embryo cDNA libraries (including preimplantation stage
embryos from unfertilized egg to blastocyst, embryonic
part of E7.5 embryos, extraembryonic part of E7.5 embryos,
and E12.5 female mesonephros/gonad) and one newborn ovary
cDNA library. Average insert size 1.5 kb. All source
libraries are cloned unidirectionally with Oligo(dT)-Not
primers. References include: (1) Genome-wide expression
profiling of mid-gestation placenta and embryo using a
15,000 mouse developmental cDNA microarray, 2000, Proc.
Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale
cDNA analysis reveals phased gene expression patterns
during preimplantation mouse develolpment, 2000,
Development, 127: 1737-1749; (3) Genome-wide mapping of
unselected transcripts from extraembryonic tissue of
7.5-day mouse embryos reveals enrichment in the t-complex
and under-representation on the X chromosome, 1998, Hum
Mol Genet 7: 1967-1978."
BASE COUNT 258 a 128 c 122 g 222 t
ORIGIN
1 aaaagaacag tgaactgcta tacaaaagca gtaaaggttt ctttctttct ttcttttttc
61 ttccctccta ctaaaagcct acacatgtgc agatatttcc tggaaagaaa atctcatgag
121 ctcaaataaa agctactttg aattcaaata ctgtttagct tttcttcata atattaatat
181 agtagaaaaa gtactgctgt ggcagcagta taagctgtat cctttgaaaa ggtatgagat
241 tgaatcccaa ataagacagt aaatatcaag gttcaatcat tgacagaatc aggtaagggt
301 tagatgctat ttagtaaaca tacttctact ctggggacag ctaaatgact tagtgggtaa
361 aagaactcac aactaagcct aatatgagtt tgatccatca gactcatatg ttgaaaggag
421 agaacagact cctgaaagtt catttctgac ttccacataa tattttgcta tgatacatca
481 gtgcccccca cacaaaatat atgcaattta aaaaatactt ctaaaggtta gaaatgtact
541 aatcctaaca ggctatctca aagcagcagt aatttctggc tcagtcattt atcactacta
601 agcaagtcag gtactactac taagatgtca ggtattggac agaaatgtag tagttctttc
661 agcttacaca tatgaggaag attgtttaag actatatgct tggctaactc aaagcaggtt
721 tttaaaaaat
//