LOCUS BG076082 724 bp mRNA linear EST 12-MAY-2010 DEFINITION H3155D10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3155D10 3', mRNA sequence. ACCESSION BG076082 VERSION BG076082.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 724) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076082.1. Other_ESTs: H3155D10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3155 row: D column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..724 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3155D10-3" /db_xref="taxon:10090" /clone="H3155D10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 196 a 152 c 147 g 229 t ORIGIN 1 aatatcatta aggatttaat acagacttgg gaataaaata aacgatctgt tacaaatcac 61 ttcctttagc ctgcactgtt aatctcaggt agtcctgagc agaatcacag cactttccag 121 tctgtgattt tatagattaa ccaaatttat taaattaaaa aatttttaca tcatttttat 181 agttacaact tagggacaga ccattaaaac aaacacatct agaaaatcag aagtgtattt 241 tatgctaaag ttactttctg tccagttcga aacactgttc cactttgatt ttttcccttc 301 tttggatttt gaaagttctc atacagctca gcaaattcct tcccttcatc ttcactaata 361 gacggtcttg tgtgggcaag tgcagtcatt aaatgtgcct ggctaatagc aaaagtggtt 421 ttgattggtc caggctggtt aagggattca tcctctccac tttggctccg gtatctgcct 481 ttgatgatgc tgatctctgc cctcagctga tctctctgct cctgggtgag gtcttggcag 541 ccttcttggg aaggtgtcct gaacacagga tgttgtgtaa ataacgggtc tttcccagga 601 gctgcaggta aatcctgagt cacggagctt ggtgcggaca gacagtgtga gctcaagtca 661 gaaggggtcc catttccaag ctccgattca tacgagcttc caaagtagag ccggtacata 721 ttga //