LOCUS BG075820 651 bp mRNA linear EST 12-MAY-2010 DEFINITION H3152B12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3152B12 3', mRNA sequence. ACCESSION BG075820 VERSION BG075820.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 651) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075820.1. Other_ESTs: H3152B12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3152 row: B column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..651 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3152B12-3" /db_xref="taxon:10090" /clone="H3152B12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 249 a 100 c 97 g 205 t ORIGIN 1 gcgatttcag acatttttat taggagattg ttgaaaagaa aaagaaaatt aaatacaata 61 acagtaaacg tggttctcac attgaaacca ggctcaaata actaggctac catagaaaaa 121 tttccaattc ttgcattatg atgtaaaaac agatttttgt acagattttg tacaacaaaa 181 ttcgtaataa ccttttatca tttttagaaa actttaaata tatagataaa aatagacaat 241 tttcataggt cctacatgaa gatgagtatg ttctgttcca agggcttgca tagagcgcaa 301 atatggttat aatatagaac aactagacgt taatatttgt aagattacaa aagcatgggg 361 accataaaat gggcacaatt ttacttgctt acaccaaaac acaaatttct aaataaacct 421 gtttaactaa aaagagggaa aaattaagtt acaaacttac aataacattt tgtgaattgt 481 agtatgtaca acaggttaat aagagtctct taacatatag tggatagctt tttgtcttcg 541 atcctaaaat tttcttttat gctgaaccaa acactaatgc attctcatag gtctttcaca 601 taagtctttt aaaactaccc catttaacag gtgactctat gccaggagca g //