LOCUS BG075657 667 bp mRNA linear EST 12-MAY-2010 DEFINITION H3149H05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3149H05 3', mRNA sequence. ACCESSION BG075657 VERSION BG075657.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 667) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075657.1. Other_ESTs: H3149H05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3149 row: H column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..667 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3149H05-3" /db_xref="taxon:10090" /clone="H3149H05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 229 a 121 c 125 g 192 t ORIGIN 1 aagtttaagt gttctttatt cgacccagag atcacactgt caaacatgag aagaacacgc 61 gtgtaactga gaaccgcttc cttgccacag ttctccctca gtctgtattt tataatctag 121 ggtttaagaa ggaaagctcc gagcaatgca ggtgtcatgt caggacaact gcagtcatta 181 tggtaatatt tcttcactgg ctacactaac ttgtgtgaag ccatgctaaa tgttacagca 241 tatctatagc ttcaaagtga ttaacctaac atcagaataa aaaggcaatg agaaagacta 301 gaaacatagt acatcaccaa ttttccgcat caatcaaata aatcaaaggt aatcagcctt 361 acattgctca tagtaaaatt gactccaagt ggcaaacaat gaacaggaaa ctattggtgt 421 gacatgaatg aatgggctgt tttgttgatg ttgatttact ttttgttttt gtaaaggagg 481 tgatccaact gccacaaggt aggcaacact ggctgcagag agcagtaggt ataacaagaa 541 aattaatgta gttttgtaga tctgtgagtc tcatgaagaa aaaaaaattc ttgcttaaga 601 attaacagtc aaacattaat atactatata cacctttgcc atttacacat tagcatcagg 661 ccattta //