LOCUS BG075643 816 bp mRNA linear EST 12-MAY-2010 DEFINITION H3149G01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3149G01 3', mRNA sequence. ACCESSION BG075643 VERSION BG075643.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 816) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075643.1. Other_ESTs: H3149G01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3149 row: G column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..816 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3149G01-3" /db_xref="taxon:10090" /clone="H3149G01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 283 a 200 c 138 g 195 t ORIGIN 1 gagacagggt ttctgtttaa tcctagaact cactttgtag accaagcagg cctcaaattc 61 aaggatcccc ttgcctttgc gccccttccc ccatgttttg attctaggct tgcggcacca 121 cacccaacaa accttttttc tttcaaaaca ctggcatgta tcagaacaat acagtgattg 181 taaaaatcct acagaaaaaa aaaaaaaaat cgacaagctg cctcaaaact aaaacttcaa 241 ctttttatta cctttagcat gtacattgct gttctgggtt cttctaacat tttcacgaga 301 cactaagaca aactcaacta gaatggtcta taattatgat ctttaaaaaa aaattaaacc 361 caaatagatt attgttggtg aatgtgttag cccagcatcc aagaggtaga aagcagagtc 421 atccttagct acagagcaag tgtgaggcca gcctgggata tagaaacctt taaaaaacaa 481 aagtaacctc aaaacagaag agaaaaaagc ttaggcatga acaatagaaa acatccacgt 541 aaggggctgt ggagatggcc cagaggttaa gaatgcatcc tgctcttcca gaaaactcag 601 ttgtatttcc cagcacccat gctagccagc tcttaactgc ctgtaccact agctccaggg 661 gatctgatgc tatgccatct tttggggcct ctacaagtgg acacacacac aaattaacat 721 agactctgac ataagcacag acacacacac agacacacac acacacacac agacacacag 781 acacacacac acacacaact ggtgtacctt tatctt //