LOCUS BG075638 697 bp mRNA linear EST 12-MAY-2010 DEFINITION H3149F07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3149F07 3', mRNA sequence. ACCESSION BG075638 VERSION BG075638.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 697) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075638.1. Other_ESTs: H3149F07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3149 row: F column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..697 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3149F07-3" /db_xref="taxon:10090" /clone="H3149F07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 202 a 146 c 157 g 192 t ORIGIN 1 agttggttta ttctttttgg tttttcaagt cagggttttt ctgtgcagct ctggttgtcc 61 tggaactagc tctgtagatc aggctggcct caaactcaca tgcctgcctt tgcttcgtga 121 ttgctgggat caaaggtgtg tgccggcttt gcctttgttt caacaggagg aaagaaacta 181 tggattttat ccaaattaat aaagtttaga tttgatgggc agaggcctca tgaagatcta 241 tgcagcatac ataaaggaag aaacccaaga ataacaacaa aacaggtaaa gtttatgttg 301 acccctttac atgggaacag ctctgagact ggctaagata tgaatgtctc cagccaggac 361 ttcagttatg catagccaat aaatcttgtt ggctacagag acctcaggac atatgtcatc 421 ctttcacatg gcatggatga agttttatct cgcactttga ttattcagtc caaatgaact 481 tatagataga tgccttaccc gctcaaacaa agagcaggga accaccatga gctggagtgc 541 acactgcaca tccatccatg tgctgatgca gaaatgtcta tcacctttga gagtgtctat 601 gttctcagag aaaaacaacc agacaccaag gaacttacag cggcctggac aagagtttcc 661 ctcgaggatc ctgagaagaa tgctgagatg ctgagac //