LOCUS BG075607 760 bp mRNA linear EST 12-MAY-2010 DEFINITION H3149C09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3149C09 3', mRNA sequence. ACCESSION BG075607 VERSION BG075607.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 760) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075607.1. Other_ESTs: H3149C09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3149 row: C column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..760 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3149C09-3" /db_xref="taxon:10090" /clone="H3149C09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 266 a 126 c 119 g 249 t ORIGIN 1 gtgtttagca tgcaacttta ttaaaaacac gtaaatggaa tacgaaaata cacttatatc 61 aatataatgc acagaaatat agcttattta gaacgaatag gttcagtact gggttacatt 121 acagaaatac caaaatacct taatttatat tatatagcac aataaaaacc agcaagtatt 181 caatctttca agatgactag catccataaa atggcctccc tcaacacaga gagcataagt 241 tatcaaattt ataattataa taagcattcg atttatattg gaaagacaaa aatgttcaag 301 gctttgtgag aatatacagc tattcagagt ttgagtatta atcggataac tttatctctc 361 acatcagggt cactgtggtc tgttaagtct tggagtttct ggtcaaactc ttttgcctcc 421 cggaatatgg aaataagttc agatttagtg aacatttcct tagtaaacag ttttgccctt 481 tttttgaatt ggaaatttat attctcaaat atttcaatga tatgaagaat attagctttt 541 gactcattct tgtgaaagag agcgaccagt gaggacatta cttcagcact gatcagttct 601 cttgtattcg cttgattttt ttgacaagca caaaaggact cttaaaatct gaaacttgat 661 tttgacactt cctttgttta acagtgagat gaaataacga acataataga taaccacgtg 721 gtgataatca aatttcacac tcaagctcac taacagcttt //