LOCUS BG075587 693 bp mRNA linear EST 26-JAN-2001 DEFINITION H3149A10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3149A10 3', mRNA sequence. ACCESSION BG075587 VERSION BG075587.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 693) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3149A10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3149 row: A column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..693 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3149A10-3" /db_xref="taxon:10090" /clone="H3149A10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 211 a 152 c 178 g 152 t ORIGIN 1 agggaagatg gagtttattg tgtctcacag ttccaggagg ataagagccc attatagctg 61 gaaggcatgg ccggccacaa gcagcaggaa aacctggctc ggggagaagg atgctgagag 121 ataacactgt accttaagtg ggaacctgag agagagctgg aagtggggcc aggctatagg 181 ctctcaaagc caccccaggc acatttcttc atccagcaag accacacacc tccgtacctc 241 cccacaaacc atcacaaatt ggggactaaa cgttcaaata cacgtgccta tgagggccat 301 ttcttattca aaccaccaca gagaccctgt ctcaaataaa taaataagga gcaatggtca 361 gcacatctgt gattccagaa tttggatagt ggaggcaagg gttcaaggtt atctgaccct 421 ggctacagat tgacttgagg tcagcctatg ctacatgagt ctccgtctca aagaaacaaa 481 caagtgaaaa aaaaaaaatc aggagctagg ctgtggaagg gccctactac cctgggatat 541 gaggctggat ctaatatcag ttaagtatta ttctgctttt aatctcagca cttgggaggc 601 tgagacagga ggatcacaga cacaagccag tctgttctac agagtaagac ctttgtttca 661 aaaggggtga gggtggatat gggggctctc ttg //