LOCUS BG075584 769 bp mRNA linear EST 12-MAY-2010 DEFINITION H3149A07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3149A07 3', mRNA sequence. ACCESSION BG075584 VERSION BG075584.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 769) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075584.1. Other_ESTs: H3149A07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3149 row: A column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..769 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3149A07-3" /db_xref="taxon:10090" /clone="H3149A07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 276 a 116 c 191 g 186 t ORIGIN 1 ggtaagtgat gtttaactga gtggcagaca aagtgacaaa acagagaaag atttgataga 61 atagaatatg ttcaactctg gaaagaagag aggaaacaga agtgacaaaa gaaataggag 121 ctcaaagaga tagctttact gggacagttt gtgcagagag aggttgtaga gagagaataa 181 ctagacacag atgaagacag attgagaaag aaaaggagaa ggagccagaa gattagaaca 241 gactgcccaa cttagtatga ggccaagcac agaaattcag gagaatcaga gagaagccag 301 attgaatgag tcaggttgga gaagagtttt aaatcaaaac agctgagttg aaccagccag 361 ccagagacca gaaagaatta ggaaggcatg acttattcag cattaagtct cagaggccga 421 aacattctag gcctagattt cacagaggct agaagcttct aagactagac ctgagttagc 481 agacagagac agtaaccatc tgaaatgcca attatatcag gtgaatacaa gttactttta 541 tagaatttgg cagctgaacc aggtataaat aaaggcctgg tttttgtttt ttgttttggt 601 tgttgttgtt ttcgatcaac atatatatta acagaaaatt tgaacaaagt tcagaggccc 661 agtacaatat catatgtttg ataccacatg tttgatccta gcacttggga ggcagaagct 721 ggtggatgtt tttgagttac aggccagcct gctctacctg gtgacttct //