LOCUS BG075490 553 bp mRNA linear EST 12-MAY-2010 DEFINITION H3147G12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3147G12 3', mRNA sequence. ACCESSION BG075490 VERSION BG075490.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 553) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075490.1. Other_ESTs: H3147G12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3147 row: G column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..553 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3147G12-3" /db_xref="taxon:10090" /clone="H3147G12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 171 a 111 c 99 g 172 t ORIGIN 1 aaatcttcct caaaattgta tttgtctcat tctcaaagag acatctttaa agaaaacatc 61 tatggctatt tctgacatct gtctcaattt gtcacagtcc attatgccaa gaatctatta 121 attttacttt accaaaccat ctcatgacag gaatttaagc ctgtttactc tcttctgtca 181 ccaaggcagc ccatctgtat aggttcagtc ccacaggaag aggacaggcc gactgtgtaa 241 ggaatggaac aagctgctat gagactagct acttttacaa acaccttctg cagctctcag 301 gtggctctcc cggggtagta ctgctagttt gactgctgca ccatcattgt tgctattaat 361 agagctacac ttaggtatta caatacatgt ggccagctgt ggcaaacatt tgttgccatt 421 ttgttcaacc ataaaacttg tcaaattagt ggttttatgg gcatacaaat aattaaggga 481 aaatatatag acagtgtgtt ttttatacat ggtaaatatg gacaaaaaaa tagattccaa 541 aatgataatg gcc //