LOCUS BG075378 706 bp mRNA linear EST 12-MAY-2010 DEFINITION H3146E07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3146E07 3', mRNA sequence. ACCESSION BG075378 VERSION BG075378.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 706) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075378.1. Other_ESTs: H3146E07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3146 row: E column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..706 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3146E07-3" /db_xref="taxon:10090" /clone="H3146E07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 165 a 177 c 190 g 174 t ORIGIN 1 gctttaaaag atattttatt cattgtgtga acccatgtgc cgtagcacgc atagtgagag 61 gacaacttgc atgaacctgt tctcctttac cataatgtga ctggtgacct gtcagcctga 121 ggactttcag tcactgttgc taggtggcag agcctgctag ccagaaccgc atctaagttt 181 gtagcttgag gttcccttgc ggtgggagtc acactcaccc agggaagttt gcaggatctg 241 atatctgaga gcttagtcag gagtggcctc ctgactagag atctgctcca gaagcaggca 301 gctcccacac aggtcacacc tctccctaac atagctgtgg gctctctatc actcactctg 361 agatggttca ctgggctgta tactgctatg ttacttcaac gtgcccattt ctaagcctta 421 gcatgcagcc atggcctctg gctctaggga tggagacaaa cattagtgaa ggtgcatctg 481 acagccaggc attcccccag cagttgactc tgagcctgag tcccctgggc tgtgaggcac 541 aggaggcttt ggtgttgggc tgaaccagaa aggcagagct gagaccctag caacaagaat 601 ttctctgagc ctcagacact gctgagggtt ctgggaagat atctactagt gctcagaggg 661 acacatccca gctggcctgg atggtggcag acacagcatg ggtgag //