LOCUS BG075227 748 bp mRNA linear EST 12-MAY-2010 DEFINITION H3144G11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3144G11 3', mRNA sequence. ACCESSION BG075227 VERSION BG075227.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 748) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075227.1. Other_ESTs: H3144G11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3144 row: G column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..748 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3144G11-3" /db_xref="taxon:10090" /clone="H3144G11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 220 a 155 c 127 g 246 t ORIGIN 1 aaatgagaga aaatcatttt tatttacata agttgtttgt acatatttga atcttgttct 61 agtcattgac tcgtttccaa tatgaaaacc aaatttaaag taagtttgcc agtcttcttc 121 aagttgttca cacatatttt ccagctcctt cctgtcaaca gattcacctc cactaaatta 181 gaggtaaaat ctattagtgc taattcagtg aagttgaatc tcgtagacag tatgaaaaca 241 ggtcaagact ttccaggatt cttctatatg tagttttctg tttgcattaa tgcactggaa 301 caagatacgt gaaatatagg tacatggtta ttccattctg ttcaaaccta ctaaagatct 361 cccagaagtt tcataatttc atcctgcaaa ttcttggaac tggaagatta tcctgttcaa 421 aaatgtaatg ttgacaaaag cttccagatt ttaagaaaaa caatcttcta attaaaagtt 481 gattggtttt ccaaaagctg cagccaagtt tgcttctcta aaagcctctg ataaggtcgg 541 atgcgcatgg cagactcgag ctatatcttc acaggaagca ccatattcca atgccagggc 601 cgcctcgttc accatttctc cagcacctgg tcctagaata tgtgctccca gcactctatc 661 tgttgactta tgtccaagaa tcttcaccat gccatctgtg tcagcatttg ttttagctct 721 gctgtttgca gcaaaggggg attttcca //