LOCUS BG075118 625 bp mRNA linear EST 12-MAY-2010 DEFINITION H3143E05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3143E05 3', mRNA sequence. ACCESSION BG075118 VERSION BG075118.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 625) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075118.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3143 row: E column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..625 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3143E05-3" /db_xref="taxon:10090" /clone="H3143E05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 175 a 126 c 136 g 188 t ORIGIN 1 atatttattt gtttatttca tgtatgtgaa tacactgttg ctgtcctcag acacactaga 61 agagggcatc taatcccatt acagatggtt gtgagccacc atgtggttgc tgggaattga 121 actcaggacc tctggaagag cagtcagtgc tcttaaccgc tgagccatct ctccagcccc 181 aggatcattc atttttatat gcctatatgt gcatatatat atgtacactg tgtatgtggc 241 tggtatcctt ggagacaaga agaggacccc taattaccta gaactggagt tagagatgtc 301 tgtgactcac catgtgggtg ctggaagggt cctgtgcaag agcagagcca tttctccagg 361 cattgagtta gttagttagt tagttagtta gttagttagt tgttgtgaca ggttttctgt 421 agctgtcctg gaactcacta catagataga ccaggctggc ctgaaactca gggatccaac 481 tgtctctgtc tcccaagacc tgggattaaa ggtatgcacc cagctaaaac ttttaaaaat 541 atttatcttt ctatatttgt cttggaaata acatttaaaa aacaacactc caaagtttaa 601 atcaaaacca gggaaaagca gccct //