LOCUS BG075047 524 bp mRNA linear EST 12-MAY-2010 DEFINITION H3142F07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3142F07 3', mRNA sequence. ACCESSION BG075047 VERSION BG075047.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 524) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075047.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3142 row: F column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..524 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3142F07-3" /db_xref="taxon:10090" /clone="H3142F07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 82 a 137 c 160 g 145 t ORIGIN 1 gtgactctgc cttttattct cacaggcaag gattcatggg aaccaacatc ggggtctacc 61 ctgagctgag ctcagtgccg aggtgactct cgtcctgaag acggctgtgg cagcctgaat 121 ttggagaggt ccaggttcag gtccaggaag gtgtatgtgt tgtagtcatg gtgctgcagg 181 ttcttgtagg tggtggtgtc agtcggctcg ggctcctgtg tgtcggccgg ggcttcctgg 241 ggtaggactg catcagtggg tggggcttcg actgccacct ggaacctccc ctccagatgt 301 ggtctggcac tctcttcaac agtatctttc tcctgaacag gaagtgtctt cgaatagctc 361 actggtttct gatcttccaa gacctcctgg acctgggagc ctccttctgg cacctgcttc 421 tctgcgcttt cttttctgag caggggagaa gaggtcttcc atccgggctc tggcactttt 481 ggttccggat atctagctcc cttcctgggg gcaacggctg gcgg //