LOCUS BG074917 646 bp mRNA linear EST 12-MAY-2010 DEFINITION H3140H12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3140H12 3', mRNA sequence. ACCESSION BG074917 VERSION BG074917.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 646) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074917.1. Other_ESTs: H3140H12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3140 row: H column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..646 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3140H12-3" /db_xref="taxon:10090" /clone="H3140H12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 161 a 184 c 171 g 130 t ORIGIN 1 gcatgtgaaa ggcatggatg gattttattt attaccctat atctacaatt tgaggtaaaa 61 tataaggaac acataaaatg cctatctctg ctaccgtgtg atataatttc ccattgtgaa 121 cattgtggtg actaccgaga accgtgccct cacgtgccta actgctgaga gctgttacct 181 tatcatcgtc tgtgagcccc cacatagggc gggacaccaa tgtcctcact ccccaccctg 241 gcgcagaggc cagacaggtg gttagagact aaccaaccag gcagacacac agcccagcct 301 gactcgaccc agacccagag ctgcggccca gagcccctga ggccactgtg ggtcccagtt 361 ggggaggggc aaatcctcca cctgctcaag catgcagacc tgacctctga cctttaggac 421 acacccagaa atctacttgc tgtaaagtaa ccggagcgag gctctgaggc tagcctctcc 481 agctgcactg cacggatgca ctggctgctc actggcggtc aggcgagctg gccggctttg 541 ctctgaatgg cagtgaggac aaaggaatcg tgatggagct tgggaagagg cttagtcaca 601 cacacagaca gcagccctcc cctggcagga ggggcagccg agtgca //