LOCUS BG074836 689 bp mRNA linear EST 12-MAY-2010 DEFINITION H3140A01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3140A01 3', mRNA sequence. ACCESSION BG074836 VERSION BG074836.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 689) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074836.1. Other_ESTs: H3140A01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3140 row: A column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..689 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3140A01-3" /db_xref="taxon:10090" /clone="H3140A01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 206 a 157 c 164 g 162 t ORIGIN 1 atgaatagac ttcttttaag ggagagctaa tgaaagttcc acatagaatc actttatcaa 61 gggcagtggg ggacaaaaca gaacttctag gagtctgtga gaaactgaaa acaatagccc 121 aatactaact tcatttcata accgggaagg cggctggaaa attctgagag aacaagagaa 181 tagaaacggg tttcagagac agtttagaaa actacaagcc catctcaatg aacagcaaag 241 aactagagga caacatcaaa tttgctggag gcttggttta ctgtggccag actactgggg 301 tgagcagtgt gggcaccaga atccaaaacc cagttcggag cagccctgca ggtgggtctt 361 catggctgca ccatgctcat tgcagggtct tcctctccac tctttggaat ccatgagaca 421 catgccactg tgcaccaaac cccagcccac aattgagctc cacaggtttt tctctcacca 481 cccgtttaaa agaaaaaata atccagcctc ttaacataga gcccttctca gaaagcaggg 541 tttctctttc cttcctcttc tcataaaagg aggtaatgtc ctcatctggt ttgagattga 601 tatgagcagt cttcaagagt gccacagata ttctcctggg ggaggatgct ggtgttggga 661 gggtggcagg gtcacagagg ccacatcag //