LOCUS BG074823 669 bp mRNA linear EST 26-JAN-2001 DEFINITION H3139G05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3139G05 3', mRNA sequence. ACCESSION BG074823 VERSION BG074823.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 669) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3139G05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3139 row: G column: 05 Seq primer: -21M13 Forward POLYA=No. FEATURES Location/Qualifiers source 1..669 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3139G05-3" /db_xref="taxon:10090" /clone="H3139G05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 191 a 124 c 110 g 169 t ORIGIN 1 cnnnnnnnnn nnnnnnacca cnnnnngaga aaacggncng gnggcanggg ccaagngcnc 61 agccacnnnn naagacnngn ncagnnncnc nccggancnn ncnnnncacn cnnnccncaa 121 ncagaagaga accggctttt ttttannncn nnaaagggcc aaggcnncag anaccncgga 181 ggcaanccaa cnaanannnc ttccaggnca tcagcgcata acagagggac ataantcttg 241 aatactttgt tgaaagttgt caggtttatt cctctgaata aataattttc tataacttaa 301 tgtaaatgta ttggctaaaa atcttatcaa atcttttata ggcaaaaatt ccattcagta 361 taagttttat ctattcagta tgagttttat cagcactcaa aattactgtg atgcgtaaag 421 gcattaacag ataacatcaa aggttttact gttgnttaac aaattatgaa gtgcaaaact 481 ttaccacatt gactatattt atagggcccc tctgcaatat aaattggctc tcgantccta 541 agactacaca caaaggtttt accacattgc ttatttatag ggtctctctc tagnatgtgc 601 tcttttatgg gttcggagat aactgcggtg ggaaaaagtt ttaccacatt cattacattc 661 atagggctt //