LOCUS BG074783 606 bp mRNA linear EST 26-JAN-2001 DEFINITION H3139B11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3139B11 3', mRNA sequence. ACCESSION BG074783 VERSION BG074783.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 606) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3139B11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3139 row: B column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..606 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3139B11-3" /db_xref="taxon:10090" /clone="H3139B11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 225 a 83 c 119 g 176 t ORIGIN 1 aaaaagaata aaaggttaat ttaattttta gcaaaaaaaa aaataatagg taaaaacagt 61 atctatttaa gggggggggg gaatagctgg agagacagct aaagggtaaa aacccntttt 121 ntttttggag gagaaatggg gnccaatttt aagaattaaa agggaaatta aaaaccaaag 181 ttaagccaag ttccggggga tcggatacag aatttgggcc tccggggccc ctaggaatgc 241 ccggggggaa tacaaattaa tgtgggaaaa acacacatgc ccgaaaaggc tggagtaaaa 301 aatttttttt aacataccta tgaattggaa aatatatata tgaccatatt tttccatgag 361 gttaaaccac ccattaccca ccatattagg gaactttttt ttaaagggtt gggaaccttt 421 aattaaattt cttttggttt ttcccaattt tgaccctttt aagcctaaat attccatacc 481 caatagataa atttaagttt taagggggga aaaagaccat gaaaaagggg tttttttttg 541 aatatttttc aattgaaaac ccgtgttatt agacccatcc atttggttaa taaaaaaatt 601 taaaaa //