LOCUS BG074701 694 bp mRNA linear EST 12-MAY-2010 DEFINITION H3138C03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3138C03 3', mRNA sequence. ACCESSION BG074701 VERSION BG074701.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 694) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074701.1. Other_ESTs: H3138C03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3138 row: C column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..694 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3138C03-3" /db_xref="taxon:10090" /clone="H3138C03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 168 a 171 c 157 g 198 t ORIGIN 1 atggttttat tatttatttt tagaaaagaa gagaaaatgt acaagatgca aagtctcata 61 caatatgtta ttattggttg cctaacacca gccctgtctt gtgactcaat gatggaaatg 121 gtggacagca ggcatgtgct ggagatggat cacagactca cagtacacca cagatgagga 181 cagatgatgc taggccagcc tgttccaaaa gcaagccaag acatggtaga aagcaagaaa 241 accaatggcc ccctctccat ggggagggca tgggtgtgaa cccacaagca ctctcccatc 301 ccacagcacc cactacccca atcagaccac agcaatacac aaaataaaat ggtcctttgg 361 tgtttttctg cagggatatt caggttccca gggtcttatt tctgattttc ttttcatatt 421 tgagtcccga attcttaaag cagtgtaggg gctttagcat cttgattttt caggatccga 481 ttctgcccaa tggtaatttg ctgagctcct gcatccgcat ctatggctcc cgctcagaag 541 acacgtcacc ctctgccccg ctgctggcgc tgcggtcttc tttgcggggt gcattccgtt 601 ctttgcttga ctcagaaggg cctttggctc tggtcttttc ttttctctgc tgctgtttct 661 ccagctttga cagctgcttt gggtcagagc tagc //