LOCUS BG074678 660 bp mRNA linear EST 12-MAY-2010 DEFINITION H3138A03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3138A03 3', mRNA sequence. ACCESSION BG074678 VERSION BG074678.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 660) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074678.1. Other_ESTs: H3138A03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3138 row: A column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..660 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3138A03-3" /db_xref="taxon:10090" /clone="H3138A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 202 a 140 c 154 g 164 t ORIGIN 1 gaagtcttta gtatgtttat tgtataaaga gtaaacaaag tgcatataga gcgagacacg 61 ggtttgacgt aaacaggggc tatggtgata tacagcaact aaaccaattt aaatggcaac 121 tgtactgttg ctactaaact gatattgaat tctttgggaa aaggactcaa aaggtgaaaa 181 aatatcaaac aagtattaaa cagcattaat gagtttgcca gactcttggt catgagtaac 241 tctgcggttc acattgaatc taaagtgaaa gctgttgatt acccagctac ctccaagtca 301 accaacaaca actacctagt gaattctgaa cttcagcccg ctgggccaag ctgtcttcct 361 ttctgtagtt tcgcagtata gggtgatgtc tcctgtttac gccactgtcg gcagcttgcc 421 ccaggggatc gtcaggaagg agtatgcact gacaatctta aaggtggatg tgaccgcatc 481 caggtcagag gagtctgcct gacagaaagc agctgttcag gaaaacacag gcacacaggt 541 ctagttctca agaagtaaca tgcagagtgt gtatgccagg ctccctcctg cagcacaggt 601 ttgccccaca gtgggtacca gtgcttaaaa cttcagtcct aaaaggtagc aggaacagac //