LOCUS BG074368 606 bp mRNA linear EST 12-MAY-2010 DEFINITION H3134C07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3134C07 3', mRNA sequence. ACCESSION BG074368 VERSION BG074368.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 606) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074368.1. Other_ESTs: H3134C07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3134 row: C column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..606 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3134C07-3" /db_xref="taxon:10090" /clone="H3134C07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 125 a 198 c 146 g 137 t ORIGIN 1 gagacagtac acatttactg catccctccc tcaaaggtac aaatggcttt gcaaccaggg 61 tgtcccatgc tcacttcagc actgttcagg gtacctgacg gggcagtccc accctttgtt 121 ccaacatcaa ttatgttttc taaagtaaag tgctgtgaca cacccctcca ctgctgagtg 181 tcccgcgcag acggcttctg tagcgtccct ctctggacac cactgtggca ctctctgggt 241 tgtgccgcct gcagccaggc ctcagttccc agggtattca aagaccgcag cagctcccat 301 cccagtcccg atgcacatgg acaccacgcc gtaagcccgt ctgccacgac gcttcagttc 361 attgagtagc gtgacaacct gccttgctcc cgtgcagccc agggggtggc ccagggctat 421 tgcacccccc agcgggttca ccttctctgc aggaattcct agcttctcca cacagtagac 481 ggcctgactt gcaaaggcct cattgatctc aaagatgtct atgtcattca cagtcagccc 541 tgctttctgc aaggctgcag ggatggcata ggcaggtccg atgcccatga cgtcaggagg 601 gacccc //