LOCUS BG074076 629 bp mRNA linear EST 12-MAY-2010 DEFINITION H3130E10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3130E10 3', mRNA sequence. ACCESSION BG074076 VERSION BG074076.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 629) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074076.1. Other_ESTs: H3130E10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3130 row: E column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..629 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3130E10-3" /db_xref="taxon:10090" /clone="H3130E10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 173 a 160 c 129 g 167 t ORIGIN 1 ccttaaagca gagccacgaa ctcaaacgaa gtaaatgatg aagactctga ggaactagca 61 gcatctcaac tgaaagtggc ctggccacgt ggcctgtgta tcacatctct gtcggcccat 121 cactgtcttg tgaacttagt gctggcatcg gctcccactc ttgaggaact tctccaaaat 181 cccctgattt tcgcatccat gcaaataaca tcttttttaa aaccttcttc tgagatgcat 241 agctaccgat ttgcatcccc tgcttccaag gccaatcagt gaagcataaa ctatcaacca 301 agaattctcc atcttggttc tgctatgttc tctttgcacg ccaattacag gtaaagacat 361 gcctaatcct tcgaaaactg ggtacctgcc tctcccaggc catgaaaact tgaaagaatg 421 ctatactttt gtctgtgtgt ataagtgttt ggctgaatga atatatatgt accatatgca 481 tgcctggtgc ccatggaggt aagaacaggg gacaggtccc ctggaactgg agttgcaagt 541 gtctgtgagc aatgtgtagg tgttgagaac caaacccaag tcctctgcaa gaacaacaag 601 tgctcttacc taccaagcca tctctccag //