LOCUS BG074044 625 bp mRNA linear EST 12-MAY-2010 DEFINITION H3130B10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3130B10 3', mRNA sequence. ACCESSION BG074044 VERSION BG074044.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 625) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG074044.1. Other_ESTs: H3130B10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3130 row: B column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..625 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3130B10-3" /db_xref="taxon:10090" /clone="H3130B10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 215 a 113 c 126 g 171 t ORIGIN 1 ctctgtccat ttaaaatgtt ttatttttct tttaaactag attgtgaagt gccattgaat 61 aggcaatgtt ggcaaaacaa tgtctgttac aataaaatac attagacatt taaataaata 121 accttaaaaa ctaggcgaag ggacagaaac ccagtcgatt ggatctggag caatgttttc 181 tgcacaagcg agacaggcaa acctctcgtg aagacggatg taaacagaac catcagacct 241 acagaagaag ccgagcaggc tggggtgggc tgggggtgac agaggctgag ggtgcaggaa 301 gtggcaaacc aaaaatactg actgaggtag caggactctg ctcagtgcag aaaaattggc 361 ttatgaataa aaattagact gtgataccaa attaaatcca gagaatcatg caaaagacac 421 aatacatgct atttagtttt ttttctttta aaaaccacac acattcattt cctaagtctg 481 ctgccaatta atttgctgac aatgtctgct ggctcaacta tctttgtaca agtatgagta 541 ttaaacagaa cactgtacat gctttttcat ctacaaaaaa atatctgcat aaaatagtgt 601 tagttctctg tacacgtcga tggac //