LOCUS BG073986 558 bp mRNA linear EST 12-MAY-2010 DEFINITION H3129E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3129E09 3', mRNA sequence. ACCESSION BG073986 VERSION BG073986.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 558) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073986.1. Other_ESTs: H3129E09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3129 row: E column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..558 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3129E09-3" /db_xref="taxon:10090" /clone="H3129E09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 142 a 143 c 150 g 123 t ORIGIN 1 cagaaaaaat ggcagccttc cctgagggag ggcagcctgt ttattggata cagaagatac 61 atttacagag tacacaaata aataactgca gtctccatcc atggtccatg gcatgaaggc 121 ctggtggacc tatcaaaggc ccggacacta aactccctct gtcttatcct cacaaccaga 181 cctactttgg gcaagagaaa aaataaatcc ccattggttc acacccccag ggattcctgg 241 ggaactggta ggtgggggaa ctctgaggct ttggctctcc actgcctcct acccaggggg 301 aggggtgtgt gaagagagca tatagaaggc acagttgact tggcacagag tggtctcttt 361 ggtttagttt cccagtggag gtggcatatg tagaaaagag cgcctcgccc aaggctgcct 421 cctgagagga gctgagtgga gctagactct tcctgctgac aggctcttaa tctagccaag 481 gcccaagcta ggctctgcct ggccccttcc tacccactga gagcagctac agatggaggg 541 aggttgcatt ccagccta //