LOCUS BG073964 524 bp mRNA linear EST 12-MAY-2010 DEFINITION H3129C06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3129C06 3', mRNA sequence. ACCESSION BG073964 VERSION BG073964.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 524) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073964.1. Other_ESTs: H3129C06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3129 row: C column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..524 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3129C06-3" /db_xref="taxon:10090" /clone="H3129C06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 166 a 101 c 104 g 153 t ORIGIN 1 aggttaagaa tttatttgct ttaaagcctg agtgaacatt tgactttaca catatttcaa 61 atgaccatgc atcctggact ccagggggtc actgacagga ttccaaagca acaaccagca 121 gcaaaccaaa gctggttaag gttttcaagt ctgcgggacc acagtaatgc tagtttcctg 181 ggactgagac ctaagccaag aagagacact tgtcaggtga tgtctgcatg acttttaaat 241 cagtaattta agatgtgaag agtggggatg ggcttctcag acactaagag tcttcttgtc 301 agaatcatgt gcccttacac atagagggaa ggcttcgctt tgcttagccc catttaccgg 361 gagcttctaa tcttctctca agttctagga tcttcacaaa aaactaaagt cttattagaa 421 aatataaaac catatttaaa taagatcttc aaagggccat tgccttcaca gacattttac 481 agttattaaa ttaatgaatc tatttataga tgagacatgg attt //