LOCUS BG073671 612 bp mRNA linear EST 12-MAY-2010 DEFINITION H3126F11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3126F11 3', mRNA sequence. ACCESSION BG073671 VERSION BG073671.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 612) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073671.1. Other_ESTs: H3126F11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3126 row: F column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..612 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3126F11-3" /db_xref="taxon:10090" /clone="H3126F11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 145 a 172 c 188 g 107 t ORIGIN 1 ccaggggaga acacgaatgt attttggaat ctgcttgtta acttgggtag caagccagca 61 gaggtcccac agccaacctg tcaaccaccc agagccaccg acctctccag acccgccagt 121 ctccttgtca actgaggctc cagtgcaagg gtcaagaggc gtctcaggag ataagaggca 181 ggacctggtg acccaaggga cagcaagcgg acgtgggcct ctccttcccg gaatggaaca 241 tggaggaatg tgtggtgtgc aaagagggat gggcagtcag gggctccctt cagtcctgag 301 tcaagccctg gcaggaagtt taggacttgg ggtggttggt acagatagcc cacatacccc 361 aacttcactc ttcttctcta ttcatctcag acctgtccag ctcccccaga atgcctgaga 421 gaagggggct agcaggaggc ctgtgggggc tgcagggtga gggaaagggt gaagggcaac 481 tctgaaatcc cctggccctt cctgcctcca gccccagtac aatcagaagg gaaggccaag 541 aaggtcgtca gccacagaag gcagcagggc ctgggaggca gggccaggag gcccctcagc 601 ctctggccat cc //