LOCUS BG073542 730 bp mRNA linear EST 12-MAY-2010 DEFINITION H3123H04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3123H04 3', mRNA sequence. ACCESSION BG073542 VERSION BG073542.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 730) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073542.1. Other_ESTs: H3123H04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3123 row: H column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..730 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3123H04-3" /db_xref="taxon:10090" /clone="H3123H04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 256 a 121 c 112 g 241 t ORIGIN 1 gacaatagaa atataagtta tttattaatc aatccactta caaagcaggt ggcttaatgc 61 aagcttattg acatcttcac atatgatcca tgggaacatg tcttccacat acagacagtg 121 gtattactga ctggatgcat ttgcaatctt gggcatatta agcatattta aacaaataaa 181 attaggctat cctgtatatg aaagtatctt gctaatatgc atcctgaagt ggattaaaac 241 ttcctccaaa ggagaaatgt tagtatgtta actttcactc tatattatgt tgtaaatctt 301 aactatagaa attaaaattt ttaagtcagt gatcgactct tggtaatgtc tgaagtgggt 361 gtctataacc atagcaacag tagcttgaca atataatctg tgcctcacag tatctgcaga 421 tttactgttt tcaagtttag agagatataa aacaagagac atgtagattc agctgacttt 481 atttaaacta taaaaaaaaa atcccttaaa agtgatcctg ggacccttag aagttctacg 541 aatgcataga tacctgccaa tgactgaatc ctaaattctg actgaatgac tttataaaaa 601 ttaatgtaag cagatatctt attcgtgctt agcagaagac ctaacaaaat tctacatgtc 661 tttttcaatt tccctatatt tttaaatctg caagtatata caatccagct atctcagatt 721 aatatttagt //