LOCUS BG073513 678 bp mRNA linear EST 12-MAY-2010 DEFINITION H3123E04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3123E04 3', mRNA sequence. ACCESSION BG073513 VERSION BG073513.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 678) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073513.1. Other_ESTs: H3123E04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3123 row: E column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..678 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3123E04-3" /db_xref="taxon:10090" /clone="H3123E04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 199 a 163 c 147 g 169 t ORIGIN 1 cagaggaaaa gtatctagca tctaaagttt attaaagatc aaagaataga aaaactttac 61 ataaaaatat gttaatttta gtgtccacat tgttgtccgc acagaaaatt taaacatggt 121 atcattttgt aaactgtagc atatggccac agtggtcgcc gggccaattc atccggttca 181 ccatgacgga gacggacaca tacctgtgcc tgtggatgac agaactttaa aacgcacatc 241 tgcgggtcac tcgaacggcc ccacggtggc tccttaatgc agatacagtc aatattgcta 301 atgtgtaaat tagtacaggc tatggaccag tgttcataaa tattctttag caacaggctt 361 cacaatttaa ataattttaa atattctgga tgactccaat cctcatgagc tgcagaccca 421 tgtgctcctc tgctctggaa tgcctcccag agtcaacagc ctcaccacgg cagcaggagg 481 cagacccaga cacacagagc ttgtccttgg cgaggtgtcc aatgtcactc agacatccat 541 tcagaatttc cactgctgca tgtcaatcag gtggcacagc actcggcttg acactctgta 601 ctggtggaca agaagcaacc tgcctgtggt gtgcagcagg tccagacccc cgttttagaa 661 gcagaagtca gagggcct //