LOCUS BG073506 727 bp mRNA linear EST 12-MAY-2010 DEFINITION H3123D08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3123D08 3', mRNA sequence. ACCESSION BG073506 VERSION BG073506.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 727) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073506.1. Other_ESTs: H3123D08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3123 row: D column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..727 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3123D08-3" /db_xref="taxon:10090" /clone="H3123D08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 223 a 144 c 147 g 213 t ORIGIN 1 aaatggaagg tacacattta ttaccagaga agagaaaaca tacacacaaa gtctggattc 61 tttctcttca tgcgctagtt ttgtaatgaa gtccaaatac caactaggag gctatttaca 121 aggacaactt cctaacgtgg ccctgcactg ttgggtgggc tgcttcttat agaaaccata 181 cactgcaaac taaatatatt cttaacagtt tacaagaagc tttagagcaa ctatggatta 241 acagagaaga ctttttagtg caaagtatta taaaagtgat acaactgtgt gcctcttaag 301 tgtttaatta tttgatttaa acaatgaaat gaggacaaaa taagtggtgg agaccagcct 361 ggctttacga ctttttatac tcaattcgtt ctgctttgac gtcatctcca attagttgat 421 agacgtaagt gaccacagta gaagcctgga tgtccatcag cacaaacgat ggaataatgt 481 ttgtttccaa ggcattatag gccccagtgg cagaacctgg gttaatgtag aatttatttt 541 catgctcaaa tgcttcaaat ttgtgtgtgt gtcctgagat aagaatgtcc acatcaaact 601 gcctctgcag cagggctaag ctagccatgt ctccccacgg aataacttgg tgtccgtgga 661 tcagaccgat cttgaactgg cccacagtca caaccttttg ttctgggtaa ttcagattct 721 catcgaa //