LOCUS BG073505 759 bp mRNA linear EST 12-MAY-2010 DEFINITION H3123D07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3123D07 3', mRNA sequence. ACCESSION BG073505 VERSION BG073505.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 759) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073505.1. Other_ESTs: H3123D07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3123 row: D column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..759 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3123D07-3" /db_xref="taxon:10090" /clone="H3123D07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 222 a 178 c 165 g 194 t ORIGIN 1 aattttaagt caattttatt taaaactaca tatataagtg ggtcaaatag cactcagaca 61 agatatctgc aactttttta aacatcgtag tccaaaaaga ctaatactta cagctgattc 121 agctcacaat actgtccctt accaagcagc agtgctgact ctagaaacat tttaccggga 181 cctctaatgg gcaacagagt cttagagcca caggccacaa acctgtgctc aaggagttta 241 gagtctagcc agacaggaag cagaggaagc agacaaaagg agccgactcc aggtccacac 301 ctctagtttt acaaaagcaa ttgctggcct acgtcatcac acaccgaagt aagcaagcca 361 tggaaacatt ttagcaacca tataccgaat gtggcatatc tatgtctgag gctggggtct 421 gactgtttag ggttggagat agaactctgg gatagatccc cagcctaaaa aaagggggtg 481 ggggacttag tcattcattt tcatctgtgt tcactaatgt ttccactcac atttagtgag 541 aacaatatcc ctataggcca cctgtaccac gctctctctt aaatggaagg atggcttacc 601 cagaccctag agcttctcta gctgcagccc ggatgtcagg cttggtaggt tttgctgctg 661 aaccgatgca caaactcagg cagcgtgtag acagctcccc atcctactgc agggtccatg 721 ctgatgaagt cgttcaggtt cattttggag tctcaagtt //