LOCUS BG073433 761 bp mRNA linear EST 12-MAY-2010 DEFINITION H3122E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3122E09 3', mRNA sequence. ACCESSION BG073433 VERSION BG073433.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 761) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073433.1. Other_ESTs: H3122E09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3122 row: E column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..761 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3122E09-3" /db_xref="taxon:10090" /clone="H3122E09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 247 a 147 c 138 g 229 t ORIGIN 1 catttcctta ctttcctggg acagtctgag ctggccttga aaccaagatc ctcttgcctt 61 agtcttcaaa ctgctgggat ttacaggcat atgaaacacc atgttaattt ttagaagagt 121 ctctgttaga aaatttctca agactgttta aggaagaaat tttattggta taacattttc 181 aaagtacagg aaataaacta ctttcttaaa attaacattt attgaaagcc tactgtcacc 241 actgcctaag gtgattggaa ttactctaat tttgcattat attaaatgca aacagtagag 301 tcataatttg cacctaggcc cagaagcctt caaaatgtat gctcttgtct tcataccatg 361 ctgcagcaaa atcatgccta ccacaacagt aaagaaaagc ctgttaaaaa ttccttccaa 421 aggaccagaa atactaaaca atggggtcta gtcaaaggta aagggaagag ttacagactt 481 tctacatggt caggtctatt cctgaatata atagctctac agtgtcccca cctacctggg 541 tctgtctgtg ctggatggag atctgttttt gggagctgca agaatgttct gtattgccag 601 aacccgtaga agaaggactg ttttgttgag cctataataa aagtacatca ccaatcacag 661 gaaagttttg catctttctc cataattgtg tatgaataga aacatttacc tctttataag 721 acaacctttc taatgatagt cagaagtcaa gacaagagga a //