LOCUS BG073431 651 bp mRNA linear EST 12-MAY-2010 DEFINITION H3122E07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3122E07 3', mRNA sequence. ACCESSION BG073431 VERSION BG073431.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 651) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073431.1. Other_ESTs: H3122E07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3122 row: E column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..651 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3122E07-3" /db_xref="taxon:10090" /clone="H3122E07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 195 a 119 c 152 g 185 t ORIGIN 1 aagcaacaaa acatgcaatt ttattaattt aattttaaaa ataatgtaaa tagtcccatg 61 tggctagtgg ctatcacacc aggaagtacc aatctgagat gagatactta aaggcaatac 121 ttagacggat gctggggctg taggaggttc tcatgagggg tacaaatttg ttgtgcctaa 181 aagcattgaa gtgtagggaa gactgggaag tggcacggtc agacttaggg tttatagttt 241 ctttagagtg ctgtattgat agaggtagac atatcattcc aatgcacaga atccacattt 301 caacaattag aacagcagtt tatgtcgttg ctcatatcac aggatacata aggctaggaa 361 gggtctcttt atgttccaga ctatcatgca ggaatccagg ctcctctctt cttgtggctg 421 ggccttcctt gaaccctgtg aaatcctgtt tagccactgg atcaagacag agactgggta 481 cacgaagagt caccataggt gtttggtgga ggttggcacc cattaccttg atcagaactt 541 agtcacaaag ctaaaactaa cttcaaggga ccctggaaat gtatctgtgt ctattaaaaa 601 taaacaattt ggctgacagc tgccacgggt aactgttgtg tggctttata t //