LOCUS BG073417 700 bp mRNA linear EST 12-MAY-2010 DEFINITION H3122D03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3122D03 3', mRNA sequence. ACCESSION BG073417 VERSION BG073417.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 700) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073417.1. Other_ESTs: H3122D03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3122 row: D column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..700 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3122D03-3" /db_xref="taxon:10090" /clone="H3122D03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 244 a 123 c 113 g 220 t ORIGIN 1 gtccccaaaa tagccagatt attttatttg atgattcaat acattttaat tcaaatagtc 61 accacaaaac ttgggcacag attaagcatt tacaagcaat gtattatgtt gattttcttt 121 acaattgcca aagagtataa taagtgaact ccttaaatga tatacttctg tacataaaaa 181 tatccatgta ttaatacaag tgtatggagc agagtttaaa ggtaataaaa ccctagtatt 241 gaaataaata ggatatgtcc atacagcgca catagcccag aacactgtgc ctagaaatgg 301 tcgaggtttc tggggacgtg cttctctgag ctatactcct atttcccata gaaaggggta 361 ggttagcaat ggctccatat ttactcaagc tctgttctgt tcgtagctct aagaacagaa 421 ttgggaattg atgatagtac agttgttatc aaactgtccc tgcgacctac caattctaaa 481 aacttcccca ttccatcttt tcaaatgcag atgacgctaa gctctagcac catacaagga 541 agaaatacat atgtttttgt cagagcaaca agatttttat atcaatcatc tttgttcttc 601 tggctataac aattttgttt agaaaaaaaa attatcaagc taaaaataat tgctctaggt 661 tgtcataaaa aagaatatta aatacctttg gtaaaaatag //