LOCUS BG073384 551 bp mRNA linear EST 12-MAY-2010 DEFINITION H3122A03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3122A03 3', mRNA sequence. ACCESSION BG073384 VERSION BG073384.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 551) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073384.1. Other_ESTs: H3122A03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3122 row: A column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..551 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3122A03-3" /db_xref="taxon:10090" /clone="H3122A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 182 a 105 c 91 g 173 t ORIGIN 1 gagaatatgt aacttgtagc tataaggtga tcttatgttg agaatttttg tcttaggtga 61 tatataaagg agtaagagaa aaagcaaagt tgttagagcc ttgcttcatc caccaagtgt 121 gtgtatgttt ccccctcttc attggccaca gagaattaag tcttgctccc ccagagaaaa 181 gactgagttg cagagtacac acccagcctc agcacctgag atgttgaagc tggcctttgg 241 aaaagcttat tcctctctta aaaaattgta aggacttaaa aaaggtgaca ccttctccac 301 aaataagttc ttctccccca atttctaaga gtattttctc ttatctctag tcttaaacac 361 cactaaactt tggtattaga ttctcacact tataaacatt attgaactat attctaattt 421 agcaatgtat tttgggaccc acctttcaaa aagctaaggt tttggcatgc aaaatataaa 481 attaccagac tgggtctcag aagtacttaa aagtctaaat cattaaaatt tataaattaa 541 gaaaattgcc c //