LOCUS BG073382 515 bp mRNA linear EST 26-JAN-2001 DEFINITION H3122A01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3122A01 3', mRNA sequence. ACCESSION BG073382 VERSION BG073382.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 515) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3122A01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3122 row: A column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..515 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3122A01-3" /db_xref="taxon:10090" /clone="H3122A01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 162 a 103 c 107 g 143 t ORIGIN 1 gagacaggct ttctctgtat agccctgact gtcctggaac tcactttgta gaccaggctg 61 aactcagaaa tccgcttgcc tctgtctcct gagtgctggg attaaggcgt gggccacccg 121 gaccgttgtt caatttttct taagtgaaat cgatttttga atgggcatat tagggctcaa 181 cagaatttac aaacaaaacc aaaaatctat atgtatatat cagcacgaaa gcaaacaaac 241 tgagttaggt aaatactgta ctatctctaa ccttcaatag ctacagggat ttcagagctc 301 attttattca tctttctttc cttgcaaagg acaggaccag agaaattaag ctaaagactc 361 agttggcaga gagagatcta cactccagtt ctattaagtc agcccactaa gcacttggtg 421 atcttataag gcaggaaaga actactagca gtgataaggt tactacagag gtaattggaa 481 actttaacac tttggggagt aagatacagt atagt //