LOCUS BG073358 728 bp mRNA linear EST 12-MAY-2010 DEFINITION H3121F10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3121F10 3', mRNA sequence. ACCESSION BG073358 VERSION BG073358.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 728) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073358.1. Other_ESTs: H3121F10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3121 row: F column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..728 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3121F10-3" /db_xref="taxon:10090" /clone="H3121F10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 221 a 167 c 138 g 202 t ORIGIN 1 cgatggtccc aagagtcact aatttttatt cataagaaat agaattttta aaaaataggt 61 tttaaaaatt caattaatat agagataaag gcaaaaacaa acaatgaaat acaagaacaa 121 ataacttcta aataacataa caataactca aagaacaaaa ataaaaactt aaaccaaaac 181 tctaaaggaa aattattgtt cagctgcttt cgctttctgc acttttagca gcacagccct 241 ccagcctgct gctcctcttg gacactaggt atcagtgcag ctgcctcagt tctctgccaa 301 gagacgttgt ctgaagagaa aagggaacaa cgccctgaat cagccatggc ttcctagtaa 361 aggcctattc accctaagaa aatgaattat atggaagaag attcatccga ggaagattgt 421 gggtcctgga gatggtgctc agcaggggcc tcctggcctg gcaactcatt ctgcaggatg 481 ctgtcttctt cagctgtggc caatcccagc tctcttgcag tttctgagac ctgatattct 541 ggagtctcga gattgctgtt ctcctcctgt tcgtctttac cactcaggtt caattccacc 601 aaacattggt gaatgatggc ccaatcagcc tgtacttcct tgctctcctg ctgcaatgtc 661 atcaacttct tctttataag attctcctcc atcaggagcc ggctgtgcag gttacgatag 721 aaatgtgt //