LOCUS BG073356 796 bp mRNA linear EST 26-JAN-2001 DEFINITION H3121F08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3121F08 3', mRNA sequence. ACCESSION BG073356 VERSION BG073356.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 796) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3121F08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3121 row: F column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..796 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3121F08-3" /db_xref="taxon:10090" /clone="H3121F08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 268 a 135 c 166 g 226 t ORIGIN 1 attttctaat ttttatttat ttttatttta acttgttttg gtagggaggt cacaaagtag 61 tgtgggggac agacatggaa ggactgggaa gtgtgacgag gatgtatgat gtgaaattct 121 cagagagtca ataaaaatgt tatgttaaaa tatcctaaca aaatgcttag aaactgaatc 181 taggaacaca ttgagaagat tacacattat gaccaagtag gcttcattcc caaaaggcaa 241 aggtgtttca acatacatat acagcaaatg gaatacagca tataaacaaa ctcaaggaca 301 gaaaaacatg aattattaaa gtaagtgctg aaaatccatt tgacagtgat aaaagctgtg 361 agactgtaga aatacatgga aatatgtcaa aataataatg gctatataca ataaatctat 421 agccaacatt atattaaata gacacactga gcatttcctc ggaaatcagg aatgagatgt 481 ccattgtccc ctacagtatc aaagtcttag atatagcaat tagataagag aagacataaa 541 agggacaata ggaagggaga aaaccacagt atcctttcct atttgagata ggttcttatt 601 aggagttctg gctggcctgg ggcatgtttt gtagaccagg ctggcttcgc actcatggag 661 atctgcctac ttctctctcc tgcctgcgac gtcaaagggt gtgctacttc acctagcaca 721 tttcctgcta ggtttttcag tgaagctcct cagactgtct tgggactcgt ggnaattttc 781 atgctcagct ctcaag //