LOCUS BG073302 696 bp mRNA linear EST 12-MAY-2010 DEFINITION H3121A07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3121A07 3', mRNA sequence. ACCESSION BG073302 VERSION BG073302.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 696) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073302.1. Other_ESTs: H3121A07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3121 row: A column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..696 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3121A07-3" /db_xref="taxon:10090" /clone="H3121A07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 164 a 188 c 170 g 174 t ORIGIN 1 cacatgatta cataatttta attcttgttt ccacgcagtt ccacaatata tcttaaatca 61 gatggtgaca gagacagcca ggactttctg tgagctttga ccaaaatagt tataatttaa 121 gaccaggcta taaacttaaa ttcacacctc aatggtaatt cttgcaaacc gatactgcag 181 tgaggttgga ggccgcagca gcaccaggcc cctcatggct gctgactggc tggacaacat 241 ttccagcaag ccggtcatac taacaaaccc taaggcttct ccacagccag cagccataga 301 aaaatctccc tgtgtgacaa agcctaggag gagcctggag cagtgtgagg ttagtcctgg 361 aagggggcct gaccacagcc cctgcgtcag agcttcctgc ccagctatgg gcggccctgc 421 ggcctggccc tcggaggctc tgtgttcccc atcctgcctc ttctcctttt tcttcttttc 481 tttctccttc agaatcaggc ttttaaatgg gtcgctgtgt ctggattccc agggtccatg 541 gtagcactga tcctgactga gccggtgcag gtcctcctta gatgggacac agatcatggt 601 gtgaggctct gggctgccct tcctgagcag ggacaagctg acccacacca gggctctggg 661 gaagtcattc agaatggaca agcagacgtt actagt //