LOCUS BG073280 548 bp mRNA linear EST 12-MAY-2010 DEFINITION H3120G09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3120G09 3', mRNA sequence. ACCESSION BG073280 VERSION BG073280.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 548) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073280.1. Other_ESTs: H3120G09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3120 row: G column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..548 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3120G09-3" /db_xref="taxon:10090" /clone="H3120G09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 143 a 105 c 164 g 136 t ORIGIN 1 ctgggggatt tttttttctt tttttattca actgaaagga taggaagagc agtagcagtt 61 tggtgagttg gggaagatgc aggagtcgtg tcagctaccc gagaagttct tttccccatt 121 gcctagggaa tcattgctaa agcgttaagt ccctagaagg aggtacacga tgtcttgggc 181 cagctggtca tcacagaaag ggagaggcca tggctaacta gctagctgac cctgaaacta 241 gggagagtaa agaccccaca ggcctgagct ccagaggatg ctgaagaggg ggaggtctga 301 gaagccacct agtgtctagc tggcacttga gtatcaatgg aggtccccag ttgtaagtga 361 tatccccttc cttgctgacc tggctgtggg caagggcctg ctatggggat attcggtgtt 421 gtttgagagc gttgggacag aagcttcaag caagaaaaga agaaagagaa gaactgagtc 481 tctcaggtgt tgtgtaccta acgggaattg aaatcagagt atgccctgag cctgtaagtt 541 caagtctt //