LOCUS BG073156 645 bp mRNA linear EST 12-MAY-2010 DEFINITION H3119D06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3119D06 3', mRNA sequence. ACCESSION BG073156 VERSION BG073156.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 645) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073156.1. Other_ESTs: H3119D06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3119 row: D column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..645 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3119D06-3" /db_xref="taxon:10090" /clone="H3119D06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 174 a 161 c 165 g 145 t ORIGIN 1 ggacattcag cctcaggccc atggagccca agaaacatgt ttattgttca agttggctca 61 tattgctgtg taggatctaa gtgcatgttg tgtgcccagc tccatagaag acccagaaaa 121 gacatcacac tgtgtacacg ggacatagga aataaggctg ctttgtgtcc ttcagggata 181 gtgcctggca gagacagata agtgctgtgt gcaaagcgct ggctaggggt ctgcatcatc 241 ttcttagaaa gcccttgccg ctgctcctgt tgccacagtt gctctgcccc ttcctgcttg 301 caaggcccag ctgtgttgct catcctcctt cagtgagtgt ctacccagca ttctctattg 361 tcccacagag ggagacaggc aagagaacac tccgaagggt ccttggtccc ctcaatgcag 421 gagagctgac aatcgagagt aaatgtgtga acctgtagct gcagcacttc tcatccatca 481 gtaaatagtg agtcaataaa tacgtgagta gacaaacagc gcacacataa atgaacgagg 541 acaaatgaac accgagacca agaccgaagg acaggaaatc tctggtgggc tacgtgatct 601 gccctaacac ttggtagaga agacagagtc ggtagggcca ccccg //