LOCUS BG073142 767 bp mRNA linear EST 12-MAY-2010 DEFINITION H3119C01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3119C01 3', mRNA sequence. ACCESSION BG073142 VERSION BG073142.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 767) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073142.1. Other_ESTs: H3119C01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3119 row: C column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..767 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3119C01-3" /db_xref="taxon:10090" /clone="H3119C01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 271 a 169 c 156 g 171 t ORIGIN 1 ccttcaatta gcaccgttta ttgtactaaa aaggtcagct tttttcagaa aactcacagg 61 agacaagccc gaggaactca ttacaggatg tcccaggaca agtggctcat ttcataactc 121 ttcacttgtt ggacagcaca gagaacagta ttcaaacttc cagctgaata acacaaacat 181 cacatctttt agagacagag atcggtttaa aaaaataaaa ccaatgtttc aatagcttgg 241 cacctgctga cttcccacac acaggcctcc acactggtct gtggccactt cactcctgca 301 atgctgcaga taagaagaga cactgagagg acactgggaa gtgttaggat gtagttcagt 361 cattttgctg atcttagagc atcagtctgc actcaaggag cccaggattt ggacaaatac 421 tcccaacagt caccctcaaa gaaggagggt agcacactgg tatttacaca gtgtgtgtag 481 taacatggaa aagacaagct aagaagttag atgaagatta ggcctacttc aatcccagcg 541 ctggaaaagc agagacagat ctctccatgt gaggccagta atcagatgtt tggtctacaa 601 agggagttct aggacagcct aggctacaga gaaaccctat ctcaataaag caaaaaacaa 661 agaagaaggg aaaagcaagc aaacaaaaaa caatgaagtt cagtgaaaaa tcaggataca 721 aaactgtata tatcttatga cctcagccac aacaaactgc tttaacc //