LOCUS BG073133 736 bp mRNA linear EST 12-MAY-2010 DEFINITION H3119A01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3119A01 3', mRNA sequence. ACCESSION BG073133 VERSION BG073133.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 736) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073133.1. Other_ESTs: H3119A01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3119 row: A column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..736 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3119A01-3" /db_xref="taxon:10090" /clone="H3119A01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 177 a 164 c 161 g 234 t ORIGIN 1 ggtttcaagg tactgtgttt ctttatttgt tcttcaatct gccatagttt aatgagtaca 61 tgattctttg acttggcatt cacttctgag ttggttttga aacaatcctt gattattgta 121 ccagctggca tgactactga tctctccatt cctttggagt gactctgcca acaggggaca 181 ggttccagtc tattccaatt tgtgtagctg tatatgtcca tatagaaaca cagaagatgc 241 ctccacctgc taatatagca tttccatatt tgtcatggaa attaggaatc ctcttctgat 301 ggctctgcct tgccaccact tgctgaatgc ttcgaacttg gagatggctt agtgtagtgc 361 gtttttggtc aaggattttg tttttcagaa ctctttgcaa ggatagctgg ggtgaatttg 421 caccaaggca gcagtgtagt caccaccgtt ccatctttgt ctctgagatg ttgcccttgt 481 atcctccttc ttaagatgct tcctgcagaa tggagtgctt caatcttgaa ggaagctttc 541 acacaacaag tcggcagctc aattcccaac aattgttcag tcgcagctgt gaatggaagt 601 ccaaggatct agcagttact cagtctcacg cagcaagcag gcgaaggagc aagagcaaga 661 gctagactcc ctttttccaa tgtccttata ttgtctccag cagaaggtgt agcccagatt 721 aaaggtgtgg tccacc //